Try re-importing your bookmarks from here :-
C:\Documents and Settings\Username\Application Data\Mozilla\Firefox\Profiles
Take a look a round in the folders for Bookmarks.html. Then use the 'Manage Bookmarks' screen in FF to import from a file. Just point it to the relevant Bookmarks.html file and voila.
As for the opening at halfsize, open a new window and maximise it. Then close FF down via the File > Exit command and restart. That should allow it to open up in fullsize the next time. That doesn't work 100% of the time though.
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